BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB028A06LP1|AL428825
(838 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig1119 1575 0.0
>3x_Contig1119
Length = 5045
Score = 1575 bits (790), Expect = 0.0
Identities = 826/840 (98%), Gaps = 2/840 (0%)
Strand = Plus / Plus
Query: 1 gatcattcttttgg-aacatacagaggactgtcttcgatcccaacaaacatccatacacc 59
|||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2284 gatcattcttttgggaacatacagaggactgtcttcgatcccaacaaacatccatacacc 2343
Query: 60 attataattctcttcatgaaatacatccagacatccaacgtcatattacacaaaaatatc 119
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2344 attataattctcttcatgaaatacatccagacatccaacgtcatattacacaaaaatatc 2403
Query: 120 tgawacacccgawatatccctaaacgggaaattattggctgtttattttagaaaagtttc 179
||| |||||||| ||||||||||||||||||||||||||||| |||||||||||||||||
Sbjct: 2404 tgaaacacccgaaatatccctaaacgggaaattattggctgtatattttagaaaagtttc 2463
Query: 180 agcagtttgtgaggagcttagaggtcaaacttatggaaacttagtttgtwatgaatttga 239
||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||
Sbjct: 2464 agcagtttgtgaggagcttagaggtcaaacttatggaaacttagtttgtaatgaatttga 2523
Query: 240 aggtcgaaatgtactctgtacataagattagacatagcaaaggtttattgaatctccact 299
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2524 aggtcgaaatgtactctgtacataagattagacatagcaaaggtttattgaatctccact 2583
Query: 300 ctttttgattacattaaagaagcagaacaaactacagacaaaatggtacgttaactgtgt 359
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2584 ctttttgattacattaaagaagcagaacaaactacagacaaaatggtacgttaactgtgt 2643
Query: 360 tatatattgttggactggcgagcgtttatgaaacaagaatgcgaaaatagcaagataaga 419
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2644 aatatattgttggactggcgagcgtttatgaaacaagaatgcgaaaatagcaagataaga 2703
Query: 420 aggcacaaatcattaatgaataaggagttaagaaaatatwatgggatawaggacagawac 479
||||||||||||||||||||||||||||||||||||||| |||||||| |||||||| ||
Sbjct: 2704 aggcacaaatcattaatgaataaggagttaagaaaatataatgggataaaggacagaaac 2763
Query: 480 accagttagatcagtggcaaatactagtaccagaagtatgtktcgaacacattatcatag 539
|||||| |||||||||||||||||||||||||||||||||| ||||||||||||||||||
Sbjct: 2764 accagtaagatcagtggcaaatactagtaccagaagtatgtgtcgaacacattatcatag 2823
Query: 540 ttcgaagatatcaaaacatatatgagttgaaagtgaagctctcattcgttggaaagagca 599
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2824 ttcgaagatatcaaaacatatatgagttgaaagtgaagctctcattcgttggaaagagca 2883
Query: 600 tcaatgatatgtgttttttttacttatgggca-catagaaatatagtactatagtggcag 658
|||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||
Sbjct: 2884 tcaatgatatgtgttttttttacttatgggcaccatagaaatatagtactatagtggcag 2943
Query: 659 ataatcaagggagcttatctgggaataggaaattcaacgatagatactgagagatcttgt 718
| |||||||||||||||||||| |||||||||||||||||||||||||||||||||||||
Sbjct: 2944 aaaatcaagggagcttatctggaaataggaaattcaacgatagatactgagagatcttgt 3003
Query: 719 tcataacactgaaagtctatccaactaaagaagttatgccagtttctctttttgaagaag 778
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3004 tcataacactgaaagtctatccaactaaagaagttatgccagtttctctttttgaagaag 3063
Query: 779 aggaataggttcagaacttacctatgaaattttggttattggaattattttactaacaac 838
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3064 aggaataggttcagaacttacctatgaaattttggttattggaattattttactaacaac 3123
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.38 0.712 1.31
Gapped
Lambda K H
1.38 0.712 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 6959
Number of Sequences: 1807
Number of extensions: 6959
Number of successful extensions: 55
Number of sequences better than 1.0e-20: 1
length of query: 838
length of database: 10,358,551
effective HSP length: 16
effective length of query: 822
effective length of database: 10,329,639
effective search space: 8490963258
effective search space used: 8490963258
T: 0
A: 40
X1: 6 (12.0 bits)
X2: 15 (29.9 bits)
S1: 12 (24.4 bits)
S2: 50 (100.2 bits)